Browse of TCMCG016C27225 protein

CDS

Accession Number	TCMCG016C27225
gbkey	CDS
Protein Id	OMO53161.1
Location	join(55462..55482,56038..56129,56230..56681,56953..57141,57735..57893,58295..58371,58659..58732,58836..59069,59168..59292,59828..60165,60261..60566,60663..61562,62423..62643,62956..63157,63237..63383,63502..63614,63892..64103,64221..64285,64458..64628,64789..64869,65420..65552,65639..65760,66169..66362,66547..66676,66792..66856,66956..67121)
Organism	Corchorus capsularis
locus_tag	CCACVL1_28845

Protein

Length	1662aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01015290.1
Definition	Histone deacetylase superfamily [Corchorus capsularis]
Locus_tag	CCACVL1_28845

EGGNOG-MAPPER Annotation

COG_category	B
Description	histone deacetylase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01009        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K11407        [VIEW IN KEGG]
EC	3.5.1.98        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko05034        [VIEW IN KEGG] ko05165        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map05034        [VIEW IN KEGG] map05165        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004407        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006325        [VIEW IN EMBL-EBI] GO:0006338        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006476        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009653        [VIEW IN EMBL-EBI] GO:0009888        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010015        [VIEW IN EMBL-EBI] GO:0010053        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016569        [VIEW IN EMBL-EBI] GO:0016570        [VIEW IN EMBL-EBI] GO:0016575        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016810        [VIEW IN EMBL-EBI] GO:0016811        [VIEW IN EMBL-EBI] GO:0019213        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0022622        [VIEW IN EMBL-EBI] GO:0030154        [VIEW IN EMBL-EBI] GO:0030856        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0033558        [VIEW IN EMBL-EBI] GO:0035601        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045595        [VIEW IN EMBL-EBI] GO:0045604        [VIEW IN EMBL-EBI] GO:0045682        [VIEW IN EMBL-EBI] GO:0048364        [VIEW IN EMBL-EBI] GO:0048731        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0048869        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090558        [VIEW IN EMBL-EBI] GO:0090627        [VIEW IN EMBL-EBI] GO:0098732        [VIEW IN EMBL-EBI] GO:0099402        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1905392        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCCGCAAAATACCCACTCGGACAAGGTCTGTGATGTTTGTGGGGGTGACAGTGCTACTACCTACGCAGAATTGCTGATACCTTGCTGCAAATGCAGCATTCAACGCCATCTCTATTGCATGAGGGTTTTTGTATGCGGAGAACAGAAAGACTGGGACCACTGGGTTTGTGAAGACTGTGTTTCGGGGAATGATGTGTCTGGCAAAGTTAATTTTGATTTAAGAAGGCAAGTTGCCCATAGAAGCCAAAAGGCTATTGAAACTGGCAAAGTGAAATTCCTTCCAACTGAGGAAGTCATCAAGCTGACTTCATGGTCACCAAACAAGGAATGTTCTTCCAAAAGCAATTTCATATCAAAACCCGAGCCACCCAAATTCACTGCTTCTCCCTCCAAGAGGACATTTATGGGATCCAAAACTGTTGGTCCTAGTGTGAACCCAGTAAGAAAGCGAGCAAATCCTAGTTATCTACAGTTTGGATCTGTGAAGCCTGCTAGAGTTGGTGGTATGCATATCGATTCTTCGATAAGTCAGCTTGGGCTCAAAACACCAAAGGATTCAAAAGAAGAAAAAGCTCCTCAGCAACGTGCAAAGGAATTCAGTAGGAATGTAAAGTTGCTATCTTCTATTATGTCTGCTATAGAAGTCAAGACTGCCAATAGCAATCCTACAGCACTGAATATAACTAAAGAGACCTTGTCTGCACCTCCGAACTCTATGCCTTCTTTGCCTTTCGTCACTGCAGGAAATAAAGCAGAAAGTGTTCATGTTTCCTACGAAGAGAATGTTCGCAAGAAACAGAAATTTGACAACATTTTACCTGACAAAGAGCAAAAAATTCTTCATCAAAAGGCTGAGGACACTCTGAGATCTAGCAGACAGTCACCATCAAGGGAGAATACAGCTTTTTTAGGTCAAAACTTTCATGGTGCTTCTGAACCTAAGAATTCTGATGTTGCAGAAAGAGAAACCTGGAATGATCAACTTAAGTTTGTTTCAAGTTATGTATGTGGCATGAAAACTCATGACGTCCTGCATATTTATTCTGGCAAATTTGCAATTAGGGGAGGTTTCAAATTTCTTGATAGTGCTACCCCGGGAGAACTGTATGGTGGTTTCTTGGCTAAACCTCCATGCATAGTCCATCGTAAGGCATATGACTTCTTGACGAACATGCCCCCAGTCATTCAGGTTAATCTACTTCATGAGTGTCACGTTCAGGAAGATTTTCTCCAGAATGGTGGTCTAGATCTCCGTGACATTGCATTCTACATTTTCCCTAAAGATGATACTGAAAGATCTCGACAGAATTACTGTCAACTGTTTCAGCTCATGGATATAAAAAACTCAGTGATGCAAAGTGACATGAATGGTGTTGAGTTGCTGATATTTACATTTAAATGGCTGCATGTAGACTCACAGGACTTGTTTCCAAGGTCAAAAGCAGACTTTTTCTGTGGAGTCTTCCGCCACAAAAAAGATAATCAAACGAAGCTACATCAGAAACTTCCTTCAATAGTGCCTCATTTGGAATATAAACATGATGATAATGCCAGCAGTGAGGCTGATATGGATATCGACATGATAGGTGGACAAGCAGTAGGGACTCTTGACATGGCTGTTTCAAAAAAGTCAACCATGGATCTCAATGAATGGGCTGGGAAAGAAATCTGTGATGCGAAAGCTCGTGGAGTTAGTAGTTCACAACCTGAAGAAATTATTGAAGATTCTAGTTTACAAGGTTCCAAGAAACAGTCTCAGGTCTTGGCATATGATGTGTTAGATGATCCTTCAGCTGCTTGTCCCCCTCCTCCCGGTTTTTCAGGAAAGGGGACTAAAGTTGGACCGGTGATTAAAATGGAAGGAAGTGACAATGAAAAACCATCTAAACTAAATGAGAAGAATGGTCTGCATGTTTCACTAGTCTCCAGCAAGGACAAATCCCACATGATTGCTCCTTCAGTCTGTGGTCCTTGTCCTGATGGAAAAGCTCGTGGAGTTAGTAGTTCAGAACCTGAAGAAATTATTGAAGATTCTAGTTTACAAGGTTCCAAGAAACCGTCCCAGGCCTTGGCATATGATGTTTTAGATGATCCTTCAGCTGCTTGTCCCCCTCCTCCCGGTTTTTCAGGAAAGGGGACTAAAGTTGGACCGGTAATTAAAACGGAAGGAACTGACAATGAAAAGCCATTTAGACTTAATGAGAAGAATGGTCTGCATTATTCACCAGTCTCCAGCAAGGACAATTCCCACATCTTTGCTCCTTCAGTCTGTGGTCCTTGTCCTGTAGAGTTGAAAGCTGAAGTGCAAGAGGTGGTGAATAATCCTTCAGCTGCTTGTCGTTCCCGTTTGGTAGATAGGGAGACAAAAATTGGATTGGAAGTCCAAGGACATGACGATGAAAAAGCCATTGTAGCAGGAGAGAAGAAAGGTGTACAAGGTTCATCTATTCCTAGCGAGGACAAATCCAAAAGGGTCACTGGTTCGTTCAATGCTTCCTGTGCTGGAGTATTCAAAGCTAAAGTGAATGTGGAAAATGATATAGTAAAGACCAGGGTAAAGTTGAGTTTTGCCGGGAGGTCACAGGGGAGGATCCCTGGTGCTACTACTGGTGGTGGGCTGATTCGGGATGAATCAGGGAAGTGGATCATTGGTTATAATCTTAAAATAGGTGTGTGCAGCTCTTTGACAACATATTTGTGGGCACTATATGAGGGATTAAAGTTGAGTTGGGATAAAGGATGTAGGAAAGTTGTGGTAGAGTCGGACTCTGTTGCTGCAGTGGAGTGCTTAAAAAAGCCTCTCTGCCTCCTTGATTCAAATAGAGCCCTTATTCAAAGCTGCAGAGATCTGCTGAATAATAATTGGGATTGCAAATTGCAGATTATCAGAAGAGACGAGAATTCATGTGCTGATTGGTTAGCTGCTAATGTGGAAGTCAACCAACAAGGATTATCTATCATTAAGCAACGGAGAGAGAGAGTGAAAGTGATGATGGAGGTGGAATCAAGTGAGAGCAAGAGTGATTTCAACCACATTAACGATGCTAAAGATCAACGGCGGGTAGGTTTAATTTACGATCAGAGGATGTGTAAGCATCGCACTCCTGATGATGAACATCATCCCGAGAATCCCAATCGAATCACCGTTATTTGGAACAAGCTCGAACTCGCCGGCATTCCTCAAAGATGTGTTCTTTTAAATGCTAAAGAGGCCGAGGATAAATACATTTGTGCCGTTCACTCCAAAAACCATGTTAATTTGATTCGAAACATAAGCTCCAAACAGTATGATTCGAAGAGAAATCGGGTAGCATCCAAGTTAAATTCCATATATTTCAATGAAGGGTCATCAGAGTCTGCTTACCTTGCAGCTGGCTCTGTCATTGAGGTTGCTGAGAAAGTGGCAAAAGGGGAACTGGATTCTGGCTTTGCCATTGTTAGGCCACCTGGGCATCATGCTGAATACAATGAAGCAATGGGATTCTGTTTATTCAACAATGTAGCTGTAGCTGCAAGTTATCTCCTTGATGAAAGGCCAGAACTCGGTATAAACAAGATCTTGATAGTTGATTGGGATGTTCATCATGGAAACGGTACTCAAAAAACTTTCTGGAAGGATCCTCGTGTTCTCTTCTTCTCTGTTCACAGGCATGAATTCGGCAGTTTTTATCCTGCTAATGACGATGGTTTTTATACCATGGTTGGAGAAGGACCAGGTGCAGGATATAATATAAATGTCCCTTGGGAGAATGGTCGGTGTGGTGATGCTGACTATCTTGCAGTTTGGGACCATATTTTAGTTCCCGTCGCCAAGGAATTCAAGCCTGATATAATTATAATATCTGCTGGATTTGATGCAGCTGTCGGTGATCCTCTAGGCGGATGTCGAGTAACACCATATGGATATTCAGTCATGCTGAAGAAGCTGATGGATTTTGCTCAAGGTAGGATTGTTTTGGCATTGGAAGGAGGATACAATCTTGATTCAATAGCAAATTCAGCCCTGGCTTGCATGGAAGTTTTGTTAGATGACAAACCTATATCTGGATTTTCAGAGGCATATCCATTTGAATCAACATGGCGAGTTATAGAAGCGGTTCGCCAGAAATTGAGTGCATTCTGGCCAACACTTGCTGATGAATTGCCAACTAAGTTAACCAATCAAAAAGCTCCTCCTCATTTTCAACTTTCAAGCTCCGAATCTGATGATGAGGATGATGAAACTACAAAAATAGTATCAGCCGAACTAGTTGCCGCTGTTGAGGATGTTGTAACGCCCCTTTTGAGGTTAAAGGTTGAAGATGATCTTGATAAAGTAACTACTACTTCTGCACCATGGAGATTGCAACTGTCTAAGAGTGACATTTGGTATGCCACTTTTGGATCAAATATGTGGAAGTCAAGGTTCCTCTGCTATATTGAAGGTGGACAGGTTGAAGGTATGAAAAAGCCATGTTCTGGTTCAATGGATAGGAACCCTCCAAAAGAGATTCTGTGGAAATCTTACCCTCACCGTCTTTTCTTTGGTCGCGATTTCACGCAGACATGGGGTCCTGGAGGGGTTGCTTTCCTCCATCCTGAAAGCAACAGCCAGGATAAAACTTACATGTGCCTATATAGAATCACGCTAGAGCAGTTCAATGATGTTTTGCTTCAGGAAAATGTTCCAGATCATGACATGAGTTCTCCTTTGTTTGACCTATATGCTTCGAACTCCATTGCAAATGAAGGTTCCTTTTCTGTGGAGGCTGTCAAGAGAGGCTGGTACCATAACGTTTTTTACCTGGGAATGGAGAATGATATCCCCATACTGACTATGACGTGTCCTCTCTCAGTGATTGAAAGCTTTAAGTCTGGAGAAATTCCTTTACGTGCCCCTGCGAAAGAATATGCTGACACCTTAATAAGAGGCCTGGTCGAAGGCAAGCAGCTATCAGAAGAGGAGGCCGCGGCTTACATACAGGAAGCAACCACAAAACCACTATGA

Protein:   MPQNTHSDKVCDVCGGDSATTYAELLIPCCKCSIQRHLYCMRVFVCGEQKDWDHWVCEDCVSGNDVSGKVNFDLRRQVAHRSQKAIETGKVKFLPTEEVIKLTSWSPNKECSSKSNFISKPEPPKFTASPSKRTFMGSKTVGPSVNPVRKRANPSYLQFGSVKPARVGGMHIDSSISQLGLKTPKDSKEEKAPQQRAKEFSRNVKLLSSIMSAIEVKTANSNPTALNITKETLSAPPNSMPSLPFVTAGNKAESVHVSYEENVRKKQKFDNILPDKEQKILHQKAEDTLRSSRQSPSRENTAFLGQNFHGASEPKNSDVAERETWNDQLKFVSSYVCGMKTHDVLHIYSGKFAIRGGFKFLDSATPGELYGGFLAKPPCIVHRKAYDFLTNMPPVIQVNLLHECHVQEDFLQNGGLDLRDIAFYIFPKDDTERSRQNYCQLFQLMDIKNSVMQSDMNGVELLIFTFKWLHVDSQDLFPRSKADFFCGVFRHKKDNQTKLHQKLPSIVPHLEYKHDDNASSEADMDIDMIGGQAVGTLDMAVSKKSTMDLNEWAGKEICDAKARGVSSSQPEEIIEDSSLQGSKKQSQVLAYDVLDDPSAACPPPPGFSGKGTKVGPVIKMEGSDNEKPSKLNEKNGLHVSLVSSKDKSHMIAPSVCGPCPDGKARGVSSSEPEEIIEDSSLQGSKKPSQALAYDVLDDPSAACPPPPGFSGKGTKVGPVIKTEGTDNEKPFRLNEKNGLHYSPVSSKDNSHIFAPSVCGPCPVELKAEVQEVVNNPSAACRSRLVDRETKIGLEVQGHDDEKAIVAGEKKGVQGSSIPSEDKSKRVTGSFNASCAGVFKAKVNVENDIVKTRVKLSFAGRSQGRIPGATTGGGLIRDESGKWIIGYNLKIGVCSSLTTYLWALYEGLKLSWDKGCRKVVVESDSVAAVECLKKPLCLLDSNRALIQSCRDLLNNNWDCKLQIIRRDENSCADWLAANVEVNQQGLSIIKQRRERVKVMMEVESSESKSDFNHINDAKDQRRVGLIYDQRMCKHRTPDDEHHPENPNRITVIWNKLELAGIPQRCVLLNAKEAEDKYICAVHSKNHVNLIRNISSKQYDSKRNRVASKLNSIYFNEGSSESAYLAAGSVIEVAEKVAKGELDSGFAIVRPPGHHAEYNEAMGFCLFNNVAVAASYLLDERPELGINKILIVDWDVHHGNGTQKTFWKDPRVLFFSVHRHEFGSFYPANDDGFYTMVGEGPGAGYNINVPWENGRCGDADYLAVWDHILVPVAKEFKPDIIIISAGFDAAVGDPLGGCRVTPYGYSVMLKKLMDFAQGRIVLALEGGYNLDSIANSALACMEVLLDDKPISGFSEAYPFESTWRVIEAVRQKLSAFWPTLADELPTKLTNQKAPPHFQLSSSESDDEDDETTKIVSAELVAAVEDVVTPLLRLKVEDDLDKVTTTSAPWRLQLSKSDIWYATFGSNMWKSRFLCYIEGGQVEGMKKPCSGSMDRNPPKEILWKSYPHRLFFGRDFTQTWGPGGVAFLHPESNSQDKTYMCLYRITLEQFNDVLLQENVPDHDMSSPLFDLYASNSIANEGSFSVEAVKRGWYHNVFYLGMENDIPILTMTCPLSVIESFKSGEIPLRAPAKEYADTLIRGLVEGKQLSEEEAAAYIQEATTKPL